Genomic Data Infrastructure for Health Research Panel

Chaired by Ana Melo

Kjell Peterson, Ana Teresa Freitas, Sérgio Sousa and Maria Salazar

Structural Bioinformatics

A bioinformatics approach to study the permeation of solutes through PfAQP for the development of new antimalarial therapies - Marta Batista

Computational study of promising smart metallodrug delivery systems - Inês Pires

Molecular Dynamics as an active resource on the development of new formulations for commercial use: The case of natural silicone alternatives - Tiago Ferreira

The impact of the SARS-CoV-2 Omicron variant on the receptor binding domain conformational dynamics and interaction with human ACE2 - Rita I. Teixeira

Multi-country outbreak of monkeypox virus: genomics as a tool to identify genetic clustering, transmission dynamics and the role of Portugal in the international virus spread

João Paulo Gomes

Genomics and Systems Biology

Energy demand and enzyme budget trade-offs modulate the accuracy of dynamic Flux Balance Analysis - David Henriques

MUG: a mutation overview of GPCR subfamily A17 receptors - Ana B. Caniceiro

A comparative genomics approach to assess interspecific variability associated with cork development - Filippo Bergeretti

Characterization of grapevine (Vitis vinifera) intra and inter-varietal diversity using whole genome resequencing - Sara Freitas

Methods and Applications

Posters nº. 5, 8, 14, 19, 20, 21, 25, 29, 30, 31, 33, 35 and 41.

Migaitas, Braga

The environmental impacts of bioinformatics: how bad is it and what can we do about it?

Loïc Lannelongue

Software and applications

Posters no. 2, 3, 6, 9, 13, 16, 17, 24, 26, 36, 37, 39 and 40.

Knowledge representation and machine learning

Identification of gene regulatory modules acting in the interaction between cork development and environmental variable - Hugo Rodrigues

The ImmunoPeptidomics Ontology: design and evaluation - Patrícia Eugénio

Exploring self-attention mechanisms and deep reinforcement learning for the de novo drug design - Tiago Pereira

ngest: A Scalable Snakemake Pipeline for Customized Knowledge Graph construction - Ana Santos-Pereira

Discussing the reality of the corporate world

Silico Life, OmniumAI, Accenture

Industrial, Braga

[1] Introduction to Chemoinformatics using DeepMol

João Capela and João Correia

[2] The importance of machine learning in structural biology -

Irina Moreira, Luana Afonso and Catarina Marques-Pereira

[3] Ontology Matching in the Biomedical Domain

Marta Silva e Patrícia Eugénio